Index

F

free_energy_surface() (plumitas.core.SamplingProject method)

G

get_bias_params() (plumitas.core.SamplingProject method) get_float() (in module plumitas.core)

grid_max (plumitas.core.GridParameters attribute) grid_min (plumitas.core.GridParameters attribute) GridParameters (class in plumitas.core)

L

load_project() (in module plumitas.core)

M

MetaDProject (class in plumitas.core)

P

parse_bias() (in module plumitas.core) PBMetaDProject (class in plumitas.core) plumitas.core (module)

plumitas.tests.test_plumitas (module) potential_of_mean_force() (plumitas.core.MetaDProject method) (plumitas.core.PBMetaDProject method)

R

read_colvar() (in module plumitas.core) read_hills() (in module plumitas.core)

reconstruct_bias_potential() (plumitas.core.MetaDProject method) (plumitas.core.PBMetaDProject method)

S

SamplingProject (class in plumitas.core)

sigma (plumitas.core.GridParameters attribute) sum_hills() (in module plumitas.core)

T

test_metad() (in module plumitas.tests.test_plumitas)

test_no_bias() (in module plumitas.tests.test_plumitas) test_pbmetad() (in module plumitas.tests.test_plumitas)

W

weight_frames() (plumitas.core.MetaDProject method) (plumitas.core.PBMetaDProject method)